Jon Hill

Bugs affecting


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Critical
In Progress
#1026041 Error checking for diagnostic field dependencies does not work when the diagnostic is dependent on a field that is hidden somewhere in the options tree
Fluidity 10
Critical
In Progress
#1333749 Multiple substitution stages lead to incorrect final subs
Supertree Toolkit 6
Critical
Fix Committed
#1404160 Don't warn when subbing "only existing"
Supertree Toolkit 6
Critical
Fix Committed
#1413375 Data ind fails if the tree names are not "standard"
Supertree Toolkit 6
High
Confirmed
#1404164 Add weights to nexus format
Supertree Toolkit 6
Medium
Fix Committed
#953905 create_param_sweep replaces wrong values into new .flml file(s)
Spud 10
Medium
In Progress
#1183080 Sigma layers fail in parallel when using flredecomp
Fluidity 6
Medium
Fix Committed
#1248217 def Val gives seg fault
Fluidity 6
Medium
Confirmed
#1389549 Error in add historical event with non-ascii data
Supertree Toolkit 6
Medium
Confirmed
#1404158 Importing subs files doesn't remove the taxa from left panel in gui
Supertree Toolkit 6
Medium
Confirmed
#1404162 Account for weighted trees in data ind
Supertree Toolkit 6
Low
In Progress
#813431 add_option in python interface returns "SPUD_NEW_KEY_WARNING"
Spud 6
Low
Incomplete
#856280 Error diff'ing two files
Spud 6
Low
Incomplete
#1197931 Diff doesn't work
Supertree Toolkit 6
Low
Fix Committed
#1380498 Auto name source doesn't take into account other source names
Supertree Toolkit 6
Low
Confirmed
#1404165 Add check box to auto-remove non-overlapping trees
Supertree Toolkit 6
Wishlist
New
#1291381 Import and export to NexML and PhyloXML formats
Supertree Toolkit 6
Wishlist
Confirmed
#1293668 Change file extension to Phylml (or some other ML)
Supertree Toolkit 6
Wishlist
New
#1404157 Allow selection of subset in data ind for removal
Supertree Toolkit 6
Wishlist
Confirmed
#1404161 Add a load in data when done check box
Supertree Toolkit 6
Undecided
New
#1066019 LinearRing Error
Meshing to Realistic Domains 6
Undecided
New
#1118408 Incorrect coordinate space used for meshing
Meshing to Realistic Domains 6
Undecided
Fix Committed
#1656264 python-graphviz has changed output variables in Ubuntu 16.04
Supertree Toolkit 6
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