Could you test whether changing the value for the new preference 'Default Window size' makes a difference (Small|Large|Maximized)? It might also be worthwhile to first make a backup copy of the preferences file (~/.config/inkscape/preferences.xml), to allow to track (diff) changes between different sessions wrt to remembered size and positions.
Possibly related to recent changes to address the complaints filed in /bugs.launchpad .net/inkscape/ +bug/830663>
- Bug #830663 “default window size is too small”
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Could you test whether changing the value for the new preference 'Default Window size' makes a difference (Small| Large|Maximized )? It might also be worthwhile to first make a backup copy of the preferences file (~/.config/ inkscape/ preferences. xml), to allow to track (diff) changes between different sessions wrt to remembered size and positions.
Which WM are you using?