Binary package “vcfanno-examples” in ubuntu mantic
examples for vcfanno: annotate a VCF with other VCFs/BEDs/tabixed files
Vcfanno allows you to quickly annotate your VCF with any number of INFO
fields from any number of VCFs or BED files. It uses a simple conf file
to allow the user to specify the source annotation files and fields and
how they will be added to the info of the query VCF.
.
* For VCF, values are pulled by name from the INFO field with special
cases of ID and FILTER to pull from those VCF columns.
* For BED, values are pulled from (1-based) column number.
* For BAM, depth (count), "mapq" and "seq" are currently supported.
.
This package contains a test data set as well as sample scripts
running some test suite provided by Debian also as autopkgtest.
Source package
Published versions
- vcfanno-examples 0.3.5+ds-1 in amd64 (Release)
- vcfanno-examples 0.3.5+ds-1build1 in amd64 (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in amd64 (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in amd64 (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in amd64 (Updates)
- vcfanno-examples 0.3.5+ds-1 in arm64 (Release)
- vcfanno-examples 0.3.5+ds-1build1 in arm64 (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in arm64 (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in arm64 (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in arm64 (Updates)
- vcfanno-examples 0.3.5+ds-1 in armhf (Release)
- vcfanno-examples 0.3.5+ds-1build1 in armhf (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in armhf (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in armhf (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in armhf (Updates)
- vcfanno-examples 0.3.5+ds-1 in i386 (Release)
- vcfanno-examples 0.3.5+ds-1build1 in i386 (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in i386 (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in i386 (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in i386 (Updates)
- vcfanno-examples 0.3.5+ds-1 in ppc64el (Release)
- vcfanno-examples 0.3.5+ds-1build1 in ppc64el (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in ppc64el (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in ppc64el (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in ppc64el (Updates)
- vcfanno-examples 0.3.5+ds-1 in riscv64 (Release)
- vcfanno-examples 0.3.5+ds-1build1 in riscv64 (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in riscv64 (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in riscv64 (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in riscv64 (Updates)
- vcfanno-examples 0.3.5+ds-1 in s390x (Release)
- vcfanno-examples 0.3.5+ds-1build1 in s390x (Proposed)
- vcfanno-examples 0.3.5+ds-1build1 in s390x (Release)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in s390x (Security)
- vcfanno-examples 0.3.5+ds-1ubuntu0.1 in s390x (Updates)