rna-star binary package in Ubuntu Lunar amd64

 Spliced Transcripts Alignment to a Reference (STAR) software based on a
 previously undescribed RNA-seq alignment algorithm that uses sequential
 maximum mappable seed search in uncompressed suffix arrays followed by
 seed clustering and stitching procedure. STAR outperforms other aligners
 by a factor of >50 in mapping speed, aligning to the human genome 550
 million 2 × 76 bp paired-end reads per hour on a modest 12-core server,
 while at the same time improving alignment sensitivity and precision. In
 addition to unbiased de novo detection of canonical junctions, STAR can
 discover non-canonical splices and chimeric (fusion) transcripts, and is
 also capable of mapping full-length RNA sequences. Using Roche 454
 sequencing of reverse transcription polymerase chain reaction amplicons,
 the authors experimentally validated 1960 novel intergenic splice
 junctions with an 80-90% success rate, corroborating the high precision
 of the STAR mapping strategy.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-01-26 04:18:59 UTC Published Ubuntu Lunar amd64 release universe science Optional 2.7.10b+dfsg-2
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Lunar amd64 proposed universe science Optional 2.7.10b+dfsg-2
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2023-01-26 04:20:09 UTC Superseded Ubuntu Lunar amd64 release universe science Optional 2.7.10b+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of rna-star 2.7.10b+dfsg-2 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  2023-01-27 06:10:12 UTC Deleted Ubuntu Lunar amd64 proposed universe science Optional 2.7.10b+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2022-12-29 01:09:17 UTC Superseded Ubuntu Lunar amd64 release universe science Optional 2.7.10a+dfsg-4
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of rna-star 2.7.10b+dfsg-1 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  2022-12-30 06:10:08 UTC Deleted Ubuntu Lunar amd64 proposed universe science Optional 2.7.10a+dfsg-4
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2022-11-13 18:29:26 UTC Superseded Ubuntu Lunar amd64 release universe science Optional 2.7.10a+dfsg-3
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of rna-star 2.7.10a+dfsg-4 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu kinetic-proposed amd64 in Primary Archive for Ubuntu