r-bioc-dnacopy 1.62.0-1build1 (armhf binary) in ubuntu groovy
Implements the circular binary segmentation (CBS) algorithm to segment DNA
copy number data and identify genomic regions with abnormal copy number.
.
This package is for analyzing array DNA copy number data, which is usually
(but not always) called array Comparative Genomic Hybridization (array CGH)
data It implements a methodology for finding change-points in these data which
are points after which the (log) test over reference ratios have changed
location. This model is that the change-points correspond to positions where
the underlying DNA copy number has changed. Therefore, change-points can be
used to identify regions of gained and lost copy number. Also provided is a
function for making relevant plots of these data.
Details
- Package version:
- 1.62.0-1build1
- Status:
- Obsolete
- Component:
- universe
- Priority:
- Optional
Downloadable files
armhf build of r-bioc-dnacopy 1.62.0-1build1 in ubuntu groovy PROPOSED produced
these files:
- r-bioc-dnacopy_1.62.0-1build1_armhf.deb (405.9 KiB)
Package relationships
- Depends on:
- libc6 (>= 2.29)
- libgfortran5 (>= 8)
- r-api-4.0
- r-api-bioc-3.11
- r-base-core (>= 4.0.0.20200528-1)