tophat-recondition 1.4-3 (amd64 binary) in ubuntu groovy
tophat-recondition is a post-processor for TopHat unmapped reads
(contained in unmapped.bam), making them compatible with downstream
tools (e.g., the Picard suite, samtools, GATK) (TopHat issue #17). It
also works around bugs in TopHat:
.
* the "mate is unmapped" SAM flag is not set on any reads in the
unmapped.bam file (TopHat issue #3)
* the mapped mate of an unmapped read can be absent from
accepted_
read's flags (TopHat issue #16)
Details
- Package version:
- 1.4-3
- Status:
- Obsolete
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of tophat-recondition 1.4-3 in ubuntu groovy PROPOSED produced
these files:
- tophat-recondition_1.4-3_all.deb (9.4 KiB)