libtfbs-perl binary package in Ubuntu Bionic armhf
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
.
Note: the TFBS perl module is no longer under active development. All the
functionality can be found in the TFBSTools Bioconductor package; users are
highly encouraged to switch. <http://
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2017-11-22 03:18:53 UTC | Published | Ubuntu Bionic armhf | release | universe | perl | Optional | 0.7.1-1 | ||
|
|||||||||
Deleted | Ubuntu Bionic armhf | proposed | universe | perl | Optional | 0.7.1-1 | |||
|
|||||||||
2017-11-22 03:48:34 UTC | Superseded | Ubuntu Bionic armhf | release | universe | perl | Optional | 0.7.0+dfsg-4build1 | ||
|