For libbio-samtools-perl it's the same situation like on kinetic.
samtools-legacy requires the PR #1258, and libbio-samtools-perl a rebuild (to link against the new libbio-dev). See update-excuse bug LP#1983255.
On top vcftools misses the 'Remove compressBound assertions' (PR #1258) fix as well.
I created a separate update-execuse bug LP#1983867.
This htslib 1.10.2-3ubuntu0.1 will at least solve kallisto, libtabixpp and probably samtools as well.
The isues with the kernels linux-hwe-5.11, linux-hwe-5.13 and linux-hwe-5.15 are all time outs on arm64, resspectively amrhf builds. So it's worth to retrigger these.
Regarding zlib focal-proposed migration:
For libbio- samtools- perl it's the same situation like on kinetic. samtools- perl a rebuild (to link against the new libbio-dev). See update-excuse bug LP#1983255.
samtools-legacy requires the PR #1258, and libbio-
On top vcftools misses the 'Remove compressBound assertions' (PR #1258) fix as well.
I created a separate update-execuse bug LP#1983867.
The mentioned issue with htslib/1.10.2-3 is because the patched htslib 1.10.2-3ubuntu0.1 (that again incl. PR #1258) is needed: /people. canonical. com/~ubuntu- archive/ proposed- migration/ focal/update_ excuses. html#htslib
https:/
This htslib 1.10.2-3ubuntu0.1 will at least solve kallisto, libtabixpp and probably samtools as well.
The isues with the kernels linux-hwe-5.11, linux-hwe-5.13 and linux-hwe-5.15 are all time outs on arm64, resspectively amrhf builds. So it's worth to retrigger these.