Comment 32 for bug 1961427

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Frank Heimes (fheimes) wrote (last edit ):

I would like to proceed on this (to not loose to much time...)

To sum things up:

On top of the actual zlib fix,
there is another patch 'Remove compressBound assertions. (PR #1258)'
needed for htslib.
Unfortunately there is a standalone 'htslib' package,
as well as a htslib version included in (some) 'bedtools' packages.
Both need to be patched.
The 'htslib' version '1.13+ds' (as it is part of I, J and K),
already includes the patch,
hence only htslib '1.10.2' in focal needs to be patched.
The bedtools version '2.30.0+dfsg' (as it is part of I, J and K),
requires the patch,
but version '2.27.1+dfsg' bedtools in focal does not incl. and embedded
htslib, hence does not need to be (actually can't be) patched.