Comment 9 for bug 302649

Revision history for this message
Jakob Runge (jakobrunge) wrote :

The weave bug seems to be still present in scipy 0.7.1

I am running Ubuntu 9.10 (Karmic) and have scipy installed from source (since it is not in the repos) without problems, the required Atlas, ... libraries were installed using synaptic

ipython:
In [2]: scipy.__version__
Out[2]: '0.7.1'

Running a weave.blitz test routine:
"...
weave.inline(code, vars, type_converters = weave.converters.blitz)
..."

Output is:
starting weavefunc..
In file included from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/applics.h:394,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vecexpr.h:26,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vecpick.cc:16,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vecpick.h:287,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vector.h:443,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/tinyvec.h:424,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array-impl.h:38,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array.h:26,
                 from /home/jakob/.python26_compiled/sc_6211de8cbbdd4538661eae1a48c2a9890.cpp:11:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/mathfunc.h: In static member function ‘static long int blitz::_bz_abs<long int>::apply(long int)’:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/mathfunc.h:45: error: ‘labs’ is not a member of ‘std’
In file included from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array/funcs.h:23,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array/newet.h:23,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array/et.h:21,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array-impl.h:2509,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array.h:26,
                 from /home/jakob/.python26_compiled/sc_6211de8cbbdd4538661eae1a48c2a9890.cpp:11:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h: In static member function ‘static int blitz::Fn_abs<int>::apply(int)’:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h:503: error: call of overloaded ‘abs(int&)’ is ambiguous
/usr/include/c++/4.4/cmath:94: note: candidates are: double std::abs(double)
/usr/include/c++/4.4/cmath:98: note: float std::abs(float)
/usr/include/c++/4.4/cmath:102: note: long double std::abs(long double)
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h: In static member function ‘static long int blitz::Fn_abs<long int>::apply(long int)’:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h:524: error: ‘labs’ is not a member of ‘std’
In file included from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/applics.h:394,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vecexpr.h:26,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vecpick.cc:16,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vecpick.h:287,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/vector.h:443,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/tinyvec.h:424,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array-impl.h:38,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array.h:26,
                 from /home/jakob/.python26_compiled/sc_6211de8cbbdd4538661eae1a48c2a9890.cpp:11:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/mathfunc.h: In static member function ‘static long int blitz::_bz_abs<long int>::apply(long int)’:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/mathfunc.h:45: error: ‘labs’ is not a member of ‘std’
In file included from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array/funcs.h:23,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array/newet.h:23,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array/et.h:21,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array-impl.h:2509,
                 from /usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/array.h:26,
                 from /home/jakob/.python26_compiled/sc_6211de8cbbdd4538661eae1a48c2a9890.cpp:11:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h: In static member function ‘static int blitz::Fn_abs<int>::apply(int)’:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h:503: error: call of overloaded ‘abs(int&)’ is ambiguous
/usr/include/c++/4.4/cmath:94: note: candidates are: double std::abs(double)
/usr/include/c++/4.4/cmath:98: note: float std::abs(float)
/usr/include/c++/4.4/cmath:102: note: long double std::abs(long double)
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h: In static member function ‘static long int blitz::Fn_abs<long int>::apply(long int)’:
/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/funcs.h:524: error: ‘labs’ is not a member of ‘std’
Traceback (most recent call last):
  File "weavetestsingle.py", line 22, in <module>
    weave.inline(code, vars, type_converters = weave.converters.blitz, compiler = 'gcc', extra_compile_args = ["-O3"])
  File "/usr/local/lib/python2.6/dist-packages/scipy/weave/inline_tools.py", line 335, in inline
    **kw)
  File "/usr/local/lib/python2.6/dist-packages/scipy/weave/inline_tools.py", line 462, in compile_function
    verbose=verbose, **kw)
  File "/usr/local/lib/python2.6/dist-packages/scipy/weave/ext_tools.py", line 365, in compile
    verbose = verbose, **kw)
  File "/usr/local/lib/python2.6/dist-packages/scipy/weave/build_tools.py", line 272, in build_extension
    setup(name = module_name, ext_modules = [ext],verbose=verb)
  File "/usr/local/lib/python2.6/dist-packages/numpy/distutils/core.py", line 186, in setup
    return old_setup(**new_attr)
  File "/usr/lib/python2.6/distutils/core.py", line 169, in setup
    raise SystemExit, "error: " + str(msg)
scipy.weave.build_tools.CompileError: error: Command "g++ -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -fPIC -I/usr/local/lib/python2.6/dist-packages/scipy/weave -I/usr/local/lib/python2.6/dist-packages/scipy/weave/scxx -I/usr/local/lib/python2.6/dist-packages/scipy/weave/blitz -I/usr/local/lib/python2.6/dist-packages/numpy/core/include -I/usr/include/python2.6 -c /home/jakob/.python26_compiled/sc_6211de8cbbdd4538661eae1a48c2a9890.cpp -o /tmp/jakob/python26_intermediate/compiler_71e584768071aa3498d8ed2c780a199b/home/jakob/.python26_compiled/sc_6211de8cbbdd4538661eae1a48c2a9890.o -O3" failed with exit status 1