python-pyvcf 0.6.7-2build1 source package in Ubuntu
Changelog
python-pyvcf (0.6.7-2build1) xenial; urgency=medium * No-change rebuild to drop python3.4 support. -- Matthias Klose <email address hidden> Tue, 19 Jan 2016 00:43:03 +0000
Upload details
- Uploaded by:
- Matthias Klose
- Uploaded to:
- Xenial
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Xenial | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
python-pyvcf_0.6.7.orig.tar.xz | 897.2 KiB | 4bf922ed2ef05180c3524a93835ebab782a75e35370eb539356a6be00bb5b1dd |
python-pyvcf_0.6.7-2build1.debian.tar.xz | 4.9 KiB | d4219de7351b837bc47a6518c0191dc9356855d03e3683b624a94d46a3b9267f |
python-pyvcf_0.6.7-2build1.dsc | 2.2 KiB | cb785c054976b81c9d141e46a2760cfc1d2519f66677a90782045dea4e2258bd |
Available diffs
- diff from 0.6.7-2 (in Debian) to 0.6.7-2build1 (320 bytes)
Binary packages built by this source
- python-pyvcf: No summary available for python-pyvcf in ubuntu zesty.
No description available for python-pyvcf in ubuntu zesty.
- python-pyvcf-examples: Example data for Variant Call Format (VCF) parser for Python
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides example data to test the Python modules.
- python3-pyvcf: No summary available for python3-pyvcf in ubuntu yakkety.
No description available for python3-pyvcf in ubuntu yakkety.
- pyvcf: helper scripts for Variant Call Format (VCF) parser
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides helper scripts using python3-pyvcf.