ncbi-tools6 6.1.20100808-2 source package in Ubuntu
Changelog
ncbi-tools6 (6.1.20100808-2) unstable; urgency=low
* Reupload to unstable following the release of Debian 6.0 (squeeze).
ncbi-tools6 (6.1.20100808-1) experimental; urgency=low
* New upstream release; the upgrade to BLAST 2.2.24 (from 2.2.21) should
address a formatdb regression. (LP: #586219.)
* Uploading to experimental because squeeze is frozen.
* debian/rules (install-indep-stamp): adapt to new ncbilogo.ico contents.
* debian/lib{ncbi6,vibrant6a}.symbols: update for latest release.
* doc/man/*.1: update for latest release.
[plus the cleanups backported to unstable in 6.1.20090809-2]
-- Ubuntu Archive Auto-Sync <email address hidden> Sat, 30 Apr 2011 13:21:43 +0000
Upload details
- Uploaded by:
- Ubuntu Archive Auto-Sync
- Uploaded to:
- Oneiric
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- oldlibs
- Urgency:
- Low Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| ncbi-tools6_6.1.20100808.orig.tar.gz | 62.1 MiB | 5302481373b86e5d9fc41cc6b405f63000d56cc2ee9fc0ffa5aeb9e611c45ff0 |
| ncbi-tools6_6.1.20100808-2.diff.gz | 124.2 KiB | 2fe9dbd64fb30b931c35b03ba6ec2ebbdf392f10a9267e2b7d60d1f7b39142bc |
| ncbi-tools6_6.1.20100808-2.dsc | 2.2 KiB | 18a9cf649ae1e65a3fc4acaca0cdbb44916d3cc8f8a449990905b935c3a0a8d9 |
Available diffs
Binary packages built by this source
- blast2: Basic Local Alignment Search Tool
The famous sequence alignment program. This is "official" NCBI version,
#2. The blastall executable allows you to give a nucleotide or protein
sequence to the program. It is compared against databases and a summary of
matches is returned to the user.
.
Note that databases are not included in Debian; they must be retrieved
manually.
- libncbi6: NCBI libraries for biology applications
The NCBI Software Development Toolkit was developed for the production and
distribution of GenBank, Entrez, BLAST, and related services by NCBI. It
allows you to read and write NCBI ASN.1 files, builds Blast or Entrez, etc.
- libncbi6-dbg: NCBI libraries for biology applications (debugging symbols)
This package is useful to provide a backtrace with symbol names in a
debugger; this facilitates interpretation of core dumps, and aids in finding
logic errors in programs using the libraries in this package (or the
libraries themselves).
.
Non-programmers will likely have little use for this package. See the
libncbi6 package for more information.
- libncbi6-dev: No summary available for libncbi6-dev in ubuntu oneiric.
No description available for libncbi6-dev in ubuntu oneiric.
- libvibrant6-dev: NCBI libraries for graphic biology applications (development files)
Vibrant allows you to develop portable (Motif, MS-Windows, Mac-OS) graphic
biological applications.
- libvibrant6a: NCBI libraries for graphic biology applications
This is the library for those who just want to run Vibrant applications.
It also includes a wrapper (vibrate) that allows many NCBI applications to
provide a GUI for selecting options.
- libvibrant6a-dbg: No summary available for libvibrant6a-dbg in ubuntu oneiric.
No description available for libvibrant6a-dbg in ubuntu oneiric.
- ncbi-data: Platform-independent data for the NCBI toolkit
This package contains support files needed by the NCBI toolkit on all
platforms.
- ncbi-rrna-data: large rRNA BLAST databases distributed with the NCBI toolkit
This package contains some ribosomal RNA BLAST databases distributed
as part of the NCBI C Toolkit that are too large and specialized to
include in ncbi-data. Specifically, it contains the databases
Combined16SrRNA_2-12- 2008, LSURef_93.fasta, and SSURef_93.fasta,
along with an alias file to facilitate searching all three of them in
conjunction with the 16SCore database included in ncbi-data.
- ncbi-tools-bin: No summary available for ncbi-tools-bin in ubuntu oneiric.
No description available for ncbi-tools-bin in ubuntu oneiric.
- ncbi-tools-x11: No summary available for ncbi-tools-x11 in ubuntu oneiric.
No description available for ncbi-tools-x11 in ubuntu oneiric.
