libtfbs-perl 0.7.1-1 source package in Ubuntu
Changelog
libtfbs-perl (0.7.1-1) unstable; urgency=medium * New upstream version 0.7.1 * d/copyright, d/watch: Stop repacking upstream sources. * d/control: - Add upstream's notice of deprecation to the package's description. - Remove cruft Makefiles at build time. - Conforms to Policy version 4.1.1. -- Charles Plessy <email address hidden> Sat, 21 Oct 2017 11:41:55 +0900
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- perl
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Bionic | release | universe | perl |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
libtfbs-perl_0.7.1-1.dsc | 2.1 KiB | 3ad8bef23bf2ed0451eab3ae1c6ad64d806551a35d1579095fb6c91dc6cb80e5 |
libtfbs-perl_0.7.1.orig.tar.gz | 379.3 KiB | 26a09a3dfff5abeee6b2bdfd8a07023d99ace3d3e28352a3e856c271186f23aa |
libtfbs-perl_0.7.1-1.debian.tar.xz | 5.8 KiB | a74077c7a56da9cccd7008b2925a65867f5e5ca5d47b915e5e715707b21876f4 |
Available diffs
No changes file available.
Binary packages built by this source
- libtfbs-perl: scanning DNA sequence with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
.
Note: the TFBS perl module is no longer under active development. All the
functionality can be found in the TFBSTools Bioconductor package; users are
highly encouraged to switch. <http://bioconductor. org/packages/ TFBSTools/>
- libtfbs-perl-dbgsym: No summary available for libtfbs-perl-dbgsym in ubuntu cosmic.
No description available for libtfbs-perl-dbgsym in ubuntu cosmic.