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libtfbs-perl package

libtfbs-perl 0.7.1+ds-2build2 source package in Ubuntu

Changelog

libtfbs-perl (0.7.1+ds-2build2) lunar; urgency=medium

  * Rebuild against new perlapi-5.36.

 -- Gianfranco Costamagna <email address hidden>  Sat, 05 Nov 2022 09:21:44 +0100

Upload details

Uploaded by:
Gianfranco Costamagna
Uploaded to:
Lunar
Original maintainer:
Debian Med
Architectures:
any
Section:
perl
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe perl
Lunar release universe perl

Downloads

File Size SHA-256 Checksum
libtfbs-perl_0.7.1+ds.orig.tar.xz 191.8 KiB 4720e694e55b9df9c9732f4e93102882005666019c49652000d1230244929e73
libtfbs-perl_0.7.1+ds-2build2.debian.tar.xz 8.4 KiB e812d6edaf71a2e114b24fb8dc3f51844d6fca3a493672d8b85b89ff97f1ab3f
libtfbs-perl_0.7.1+ds-2build2.dsc 2.2 KiB 5d5c6bfc3ce43a423581d92409c26a09b7d603877167b6d19d66b24b44a1743f

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Binary packages built by this source

libtfbs-perl: scanning DNA sequence with a position weight matrix

 The TFBS perl modules comprise a set of routines to interact with the
 Transfac and Jaspar databases that describe a special family of proteins,
 the transcription factors. These bind to genomic DNA to initiate (or
 prevent) the readout of a gene. Once multiple binding sites are known
 for a transcription factor, these are gathered in a single file and are
 aligned in order to find position-specific characteristica that might
 be used to predict such binding events in novel DNA sequences.
 .
 If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
 TFBS: Computational framework for transcription factor binding site analysis.
 Bioinformatics 18:1135-1136".
 .
 Note: the TFBS perl module is no longer under active development. All the
 functionality can be found in the TFBSTools Bioconductor package; users are
 highly encouraged to switch. <http://bioconductor.org/packages/TFBSTools/>

libtfbs-perl-dbgsym: debug symbols for libtfbs-perl