libtfbs-perl 0.6.0+dfsg-1 source package in Ubuntu
Changelog
libtfbs-perl (0.6.0+dfsg-1) unstable; urgency=medium
* New upstream version
* cme fix dpkg-control
* debian/rules: Clean up from get-orig-source since there is a real
release
* debian/copyright: Exclude several files which are either cruft adding
useless bytes to the archive and on the other hand making the build
quite complex (Makefile with broken clean target which deletes itself
afterwards anyway) all those files are deleted
-- Andreas Tille <email address hidden> Tue, 14 Jan 2014 14:53:42 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- perl
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Trusty | release | universe | perl |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| libtfbs-perl_0.6.0+dfsg-1.dsc | 1.5 KiB | 1b3a2ed92abf44cdda9750e95cbbeea359ac10fdb8dfac12e40b2647fddcf69d |
| libtfbs-perl_0.6.0+dfsg.orig.tar.xz | 159.4 KiB | d45d903516a0bad5d5d3d2c2018c983b3d034d7cc4e976cc2c516b55b5ec01a9 |
| libtfbs-perl_0.6.0+dfsg-1.debian.tar.gz | 4.0 KiB | df84a66c79a6e1dc28713d9725ee14b56d7bbe91947f157488764f8d6857fc19 |
Available diffs
- diff from 0.5.svn.20100421-2 to 0.6.0+dfsg-1 (69.2 KiB)
No changes file available.
Binary packages built by this source
- libtfbs-perl: scanning DNA sequence with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
