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libtfbs-perl package

libtfbs-perl 0.5.svn.20100421-1build1 source package in Ubuntu

Changelog

libtfbs-perl (0.5.svn.20100421-1build1) precise; urgency=low

  * Rebuild for Perl 5.14.
 -- Colin Watson <email address hidden>   Thu, 17 Nov 2011 07:29:44 +0000

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Uploaded by:
Colin Watson
Uploaded to:
Precise
Original maintainer:
Debian Med
Architectures:
any
Section:
perl
Urgency:
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Precise release universe perl

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libtfbs-perl_0.5.svn.20100421.orig.tar.gz 141.2 KiB b2dae09ba11f882b7598ffc7745e51d33f47a48088a499e80e3dcc8b527425e6
libtfbs-perl_0.5.svn.20100421-1build1.diff.gz 3.4 KiB ba4ef1477d98f7a0ff612e92b6c447219fa92b57af5080a15285af6230823ece
libtfbs-perl_0.5.svn.20100421-1build1.dsc 2.2 KiB b91122e15540f74f670bbca4ca0bc2f4332d806bbfac9988a21a0c94459dc6c3

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Binary packages built by this source

libtfbs-perl: scanning DNA sequence with a position weight matrix

 The TFBS perl modules comprise a set of routines to interact with the
 Transfac and Jaspar databases that describe a special family of proteins,
 the transcription factors. These bind to genomic DNA to initiate (or
 prevent) the readout of a gene. Once multiple binding sites are known
 for a transcription factor, these are gathered in a single file and are
 aligned in order to find position-specific characteristica that might
 be used to predict such binding events in novel DNA sequences.
 .
 If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
 TFBS: Computational framework for transcription factor binding site analysis.
 Bioinformatics 18:1135-1136".