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bbfa235
(Get the code!)
Still no move on the debian side. I have a branch and ppa with the patches from comment #4, but it's a big set of patches, it's even pulling in a gzip decompressor (TinyDeflate - commit 966d69c603b5a6a
Another alternative is to export CAIRO_DEBUG_PDF=1 before running doxygen. That will produce PDFs with the MediaBox as before, but I don't know what else will change in the generated PDF, and it's definitely a workaround just for fenics-dolfinx, not any other package using doxygen.