bio-vcf 0.9.5-2 source package in Ubuntu
Changelog
bio-vcf (0.9.5-2) unstable; urgency=medium * Source-only upload -- Andreas Tille <email address hidden> Fri, 05 Feb 2021 14:34:20 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| bio-vcf_0.9.5-2.dsc | 2.0 KiB | 19b272d68bd64f1d619b1b9e057bbc8adcee2cd279ba7cd772e90d94ba995a9f |
| bio-vcf_0.9.5.orig.tar.gz | 194.3 KiB | 7775742829deec585db2a379139acfc16b61de5bde5a7500be77c8c1d871bc2c |
| bio-vcf_0.9.5-2.debian.tar.xz | 4.3 KiB | 6371df4e05eb53f5d4319e712f57e59a2d40366d27006afea4c32b14ee0f7d07 |
Available diffs
- diff from 0.9.5-1 to 0.9.5-2 (294 bytes)
No changes file available.
Binary packages built by this source
- bio-vcf: domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the
VCF format. Record named fields can be queried with regular
expressions, e.g.
.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[ rec.alt] >4
.
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf
is not only very fast for genome-wide (WGS) data, it also comes with a
really nice filtering, evaluation and rewrite language and it can
output any type of textual data, including VCF header and contents in
RDF and JSON.
