Comment 9 for bug 598312

Revision history for this message
Tiago Antao (tiagoantao) wrote : Re: [Bug 598312] Re: Error loading frecuencies from datafile

As it stands, the code only allows the load of microsatellite data,
not SNPS, correct?

2010/6/25 Tiago Antão <email address hidden>:
> Don't worry, I will sort this one myself.
> I misunderstood your previous comment and thought you tried to commit.
> The current version is probably inconsistent with your repository as I
> have made some changes (corrected most of the bugs by now).
>
> Tiago
>
> 2010/6/25 Andrés Pérez-Figueroa <email address hidden>:
>> push or commit?
>>
>> I've tried
>>
>> bzr commit -m "Fixed Bug: 598460" src/NewAge/Sim/LifeHistory.py
>>
>>
>> but  it causes:
>> bzr: ERROR: Cannot lock
>> LockDir(lp-69743952:///~tiagoantao/newage/trunk/.bzr/branchlock): Transport
>> operation not possible: readonly transport
>>
>> I've already have a ssh-key in launchpad. Maybe you have to give me write
>> access....
>>
>> 2010/6/25 Tiago Antao <email address hidden>
>>
>>> Don't forget to push the change so that I can see it (bzr push)
>>>
>>> You will probably need to set up an ssh key with launchpad
>>>
>>> --
>>> Error loading frecuencies from datafile
>>> https://bugs.launchpad.net/bugs/598312
>>> You received this bug notification because you are a direct subscriber
>>> of the bug.
>>>
>>> Status in newAge: A population genetics workbench to simulate and analise
>>> age-structured populations: New
>>>
>>> Bug description:
>>> When setting to read frecuencies from datafile it launchs this error:
>>>
>>> Traceback (most recent call last):
>>>  File "/home/andres/tasks/NewAge/soft/src/NewAge/UI/wxUI.py", line 256, in
>>> __simulate
>>>    genome = Genome(pars)
>>>  File "/home/andres/tasks/NewAge/soft/src/NewAge/Sim/Genome.py", line 12,
>>> in __init__
>>>    self.createOps()
>>>  File "/home/andres/tasks/NewAge/soft/src/NewAge/Sim/Genome.py", line 58,
>>> in createOps
>>>    self._loadData(self.filename)
>>> AttributeError: Genome instance has no attribute '_loadData'
>>>
>>> To unsubscribe from this bug, go to:
>>> https://bugs.launchpad.net/newage/+bug/598312/+subscribe
>>>
>>
>>
>> --
>> **********************************************
>> Andrés Pérez-Figueroa.
>>
>> Postdoc at
>>
>> Dep. Bioquímica, Xenética e Inmunoloxía.
>> Facultade de Bioloxía. Universidade de Vigo.
>> 36310 Vigo. Spain.
>> -------------------------------------------------------
>> web: http://webs.uvigo.es/anpefi
>> e-mail: <email address hidden>
>> Tfn/fax: (34) 986 813828
>> Skype: andres.perez.figueroa
>> **********************************************
>>
>> --
>> Error loading frecuencies from datafile
>> https://bugs.launchpad.net/bugs/598312
>> You received this bug notification because you are a member of newAge,
>> which is the registrant for newAge.
>>
>> Status in newAge: A population genetics workbench to simulate and analise age-structured populations: New
>>
>> Bug description:
>> When setting to read frecuencies from datafile it launchs this error:
>>
>> Traceback (most recent call last):
>>  File "/home/andres/tasks/NewAge/soft/src/NewAge/UI/wxUI.py", line 256, in __simulate
>>    genome = Genome(pars)
>>  File "/home/andres/tasks/NewAge/soft/src/NewAge/Sim/Genome.py", line 12, in __init__
>>    self.createOps()
>>  File "/home/andres/tasks/NewAge/soft/src/NewAge/Sim/Genome.py", line 58, in createOps
>>    self._loadData(self.filename)
>> AttributeError: Genome instance has no attribute '_loadData'
>>
>>
>>
>
>
>
> --
> "If you want to get laid, go to college.  If you want an education, go
> to the library." - Frank Zappa
>

--
"If you want to get laid, go to college. If you want an education, go
to the library." - Frank Zappa