Please backport conservation-code 20110309.0-1 (universe) from raring

[Sasa Paporovic]

Please backport conservation-code 20110309.0-1 (universe) from raring to precise, quantal.
The builds run with succes, performed by backportpackage over pbuilder. The installation of the packages were done in precise and quantal over gdebi with success. A function test was performed in precise and quantal with utilisation of the score_conservation script which is in conservation_code package. The example 1 from

man score_conservation

runned with success.

Reason for the backport:
========================
The package concavity which is bending approval for backporting to quantal and precise
is signifiacant enhanced with the capabilities of conservation-code.
concavity uses protein 3D information to calculate ligand binding sides, which is the first stage in in silico pharmaceutical resarch(followed by docking e.g with autodock-vina).
For enhancing the precision of the ligand binding side calculations concavity needs informations about conserved chains in proteins. This calculation are done by conservation-code.

Testing:
========

* precise:
[x] Package builds without modification
[x] conservation-code installs cleanly and runs
* quantal:
[x] Package builds without modification
[x] conservation-code installs cleanly and runs

No reverse dependencies

[Sasa Paporovic (melchiaros)]

The backport request for concavity can be found here:

https://bugs.launchpad.net/quantal-backports/+bug/1165011

The debian alioth (tasks) point on the enhancement connection between concavity and conservation-code.

The manpages of concavity point also to this.

My own experiments gives this too.

Let us belive.

melchiaros

[Felix Geyer (debfx)]

Accepted into backports.