r-cran-ape-dbgsym 3.4-1 (i386 binary) in ubuntu xenial
This package provides functions for reading, writing, plotting, and
manipulating phylogenetic trees, analyses of comparative data in a
phylogenetic framework, ancestral character analyses, analyses of
diversification and macroevolution, computing distances from allelic
and nucleotide data, reading and writing nucleotide sequences as
well as importing from BioConductor, and several tools such as
Mantel's test, generalized skyline plots, graphical exploration of
phylogenetic data (alex, trex, kronoviz), estimation of absolute
evolutionary rates and clock-like trees using mean path lengths and
penalized likelihood. Phylogeny estimation can be done with the NJ,
BIONJ, ME, MVR, SDM, and triangle methods, and several methods
handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the
corresponding triangle method). Some functions call external
applications (PhyML, Clustal, T-Coffee, Muscle) whose results are
returned into R.
Details
- Package version:
- 3.4-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
- r-cran-ape-dbgsym_3.4-1_i386.ddeb (69.7 KiB)
Package relationships
- Depends on: