gmap binary package in Ubuntu Trusty i386
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2013-10-18 14:25:21 UTC | Published | Ubuntu Trusty i386 | release | multiverse | science | Optional | 2012-06-12-1ubuntu1 | ||
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