mafft binary package in Ubuntu Trusty amd64

 MAFFT is a multiple sequence alignment program which offers three
 accuracy-oriented methods:
  * L-INS-i (probably most accurate; recommended for <200 sequences;
    iterative refinement method incorporating local pairwise alignment
    information),
  * G-INS-i (suitable for sequences of similar lengths; recommended for
    <200 sequences; iterative refinement method incorporating global
    pairwise alignment information),
  * E-INS-i (suitable for sequences containing large unalignable regions;
    recommended for <200 sequences),
 and five speed-oriented methods:
  * FFT-NS-i (iterative refinement method; two cycles only),
  * FFT-NS-i (iterative refinement method; max. 1000 iterations),
  * FFT-NS-2 (fast; progressive method),
  * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive
    method with a rough guide tree),
  * NW-NS-PartTree-1 (recommended for ∼50,000 sequences; progressive
    method with the PartTree algorithm).

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2014-04-27 18:10:10 UTC Deleted Ubuntu Trusty amd64 proposed universe science Optional 7.130-1
  • Removed from disk .
  • Removal requested .
  • Deleted by Adam Conrad

    Moved to utopic-proposed

  • Published
  2014-01-19 05:18:54 UTC Superseded Ubuntu Trusty amd64 proposed universe science Optional 7.127-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of mafft 7.130-1 in ubuntu trusty PROPOSED
  • Published
  2013-11-30 16:43:21 UTC Superseded Ubuntu Trusty amd64 proposed universe science Optional 7.123-1ubuntu1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of mafft 7.127-1 in ubuntu trusty PROPOSED
  • Published
  2013-10-23 16:48:29 UTC Published Ubuntu Trusty amd64 release universe science Optional 7.123-1
  • Published
  • Copied from ubuntu trusty-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Trusty amd64 proposed universe science Optional 7.123-1
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2013-10-23 16:49:50 UTC Superseded Ubuntu Trusty amd64 release universe science Optional 6.940-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of mafft 7.123-1 in ubuntu trusty PROPOSED
  • Published
  • Copied from ubuntu raring-proposed amd64 in Primary Archive for Ubuntu

Source package