gmap 2012-06-12-1ubuntu1 (armel binary) in ubuntu quantal
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
Details
- Package version:
- 2012-06-12-1ubuntu1
- Status:
- Obsolete
- Component:
- multiverse
- Priority:
- Optional
Downloadable files
armel build of gmap 2012-06-12-1ubuntu1 in ubuntu quantal RELEASE produced
these files:
- gmap_2012-06-12-1ubuntu1_armel.deb (7.3 MiB)
Package relationships
- Depends on: