Binary package “libgkarrays-dev” in ubuntu oracular
library to query large collection of NGS sequences (development)
Gk-arrays are provided as a simple-to-use C++ library dedicated to
queries on large collection of sequences as produced by high-throughput
sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).
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Gk-arrays index k-mers of reads and allows one to answer different queries
on that read collection (e.g. how many reads share this k-mer? where does
this k-mer occur in the read collection?).
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Gk-arrays consist of a space-efficient alternative to hash tables while
being similar in terms of query times.
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This is the development library for libgkarrays.
Source package
Published versions
- libgkarrays-dev 2.1.0+dfsg-4.2build1 in amd64 (Release)
- libgkarrays-dev 2.1.0+dfsg-4.2build1 in arm64 (Release)
- libgkarrays-dev 2.1.0+dfsg-4.2build1 in armhf (Release)
- libgkarrays-dev 2.1.0+dfsg-4.2build1 in ppc64el (Release)
- libgkarrays-dev 2.1.0+dfsg-4.2build1 in riscv64 (Release)
- libgkarrays-dev 2.1.0+dfsg-4.2build1 in s390x (Release)