art-nextgen-simulation-tools binary package in Ubuntu Noble s390x

 ART is a set of simulation tools to generate synthetic next-generation
 sequencing reads. ART simulates sequencing reads by mimicking real
 sequencing process with empirical error models or quality profiles
 summarized from large recalibrated sequencing data. ART can also
 simulate reads using user own read error model or quality profiles. ART
 supports simulation of single-end, paired-end/mate-pair reads of three
 major commercial next-generation sequencing platforms: Illumina's
 Solexa, Roche's 454 and Applied Biosystems' SOLiD. ART can be used to
 test or benchmark a variety of method or tools for next-generation
 sequencing data analysis, including read alignment, de novo assembly,
 SNP and structure variation discovery. ART was used as a primary tool
 for the simulation study of the 1000 Genomes Project . ART is
 implemented in C++ with optimized algorithms and is highly efficient in
 read simulation. ART outputs reads in the FASTQ format, and alignments
 in the ALN format. ART can also generate alignments in the SAM
 alignment or UCSC BED file format. ART can be used together with genome
 variants simulators (e.g. VarSim) for evaluating variant calling tools
 or methods.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-12-19 03:23:36 UTC Published Ubuntu Noble s390x release universe science Optional 20160605+dfsg-5
  • Published
  • Copied from ubuntu noble-proposed s390x in Primary Archive for Ubuntu
  Deleted Ubuntu Noble s390x proposed universe science Optional 20160605+dfsg-5
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  2023-12-19 03:26:22 UTC Superseded Ubuntu Noble s390x release universe science Optional 20160605+dfsg-4build2
  • Removal requested .
  • Superseded by s390x build of art-nextgen-simulation-tools 20160605+dfsg-5 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu jammy-proposed s390x in Primary Archive for Ubuntu