jellyfish binary package in Ubuntu Noble arm64
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
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JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2024-04-09 13:42:42 UTC | Published | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.1-3build1 | ||
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Deleted | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-3build1 | |||
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2024-04-09 18:10:18 UTC | Deleted | Ubuntu Noble arm64 | updates | universe | science | Optional | 2.3.1-2build1 | ||
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2024-04-09 13:43:00 UTC | Superseded | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.1-3 | ||
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2024-04-10 18:10:23 UTC | Deleted | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-3 | ||
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2024-03-19 22:58:45 UTC | Superseded | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-2.1build1 | ||
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2024-03-02 22:15:19 UTC | Superseded | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-2.1 | ||
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2024-03-29 03:56:46 UTC | Superseded | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.1-2build1 | ||
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2024-04-09 18:10:18 UTC | Deleted | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-2build1 | ||
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2024-01-10 19:22:45 UTC | Superseded | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-2 | ||
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2024-02-15 04:35:19 UTC | Superseded | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.1-1 | ||
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2024-02-16 06:10:17 UTC | Deleted | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.1-1 | ||
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2023-12-14 05:43:16 UTC | Superseded | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.0-17 | ||
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2024-01-13 18:10:15 UTC | Deleted | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.0-17 | ||
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2023-12-13 17:03:37 UTC | Superseded | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.0-16build1 | ||
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2024-01-13 06:10:15 UTC | Deleted | Ubuntu Noble arm64 | proposed | universe | science | Optional | 2.3.0-16build1 | ||
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2023-11-01 03:55:09 UTC | Superseded | Ubuntu Noble arm64 | release | universe | science | Optional | 2.3.0-16 | ||
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