atac binary package in Ubuntu Noble arm64

 atac computes a one-to-one pairwise alignment of large DNA sequences. It first
 finds the unique k-mers in each sequence, chains them to larger blocks, and
 fills in spaces between blocks. It was written primarily to transfer
 annotations between different assemblies of the human genome.
 .
 The output is a set of ungapped 'matches', and a set of gapped 'runs' formed
 from the matches. Each match or run associates one sequence with the other
 sequence. The association is 'unique', in that there is no other (sizeable)
 associations for either sequence. Thus, large repeats and duplications are not
 present in the output - they appear as unmapped regions.
 .
 Though the output is always pairwise, atac can cache intermediate results to
 speed a comparisons of multiple sequences.
 .
 This package is part of the Kmer suite.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2024-02-23 20:57:50 UTC Published Ubuntu Noble arm64 release universe science Optional 0~20150903+r2013-8build4
  • Published
  • Copied from ubuntu noble-proposed arm64 in Primary Archive for Ubuntu
  Deleted Ubuntu Noble arm64 proposed universe science Optional 0~20150903+r2013-8build4
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  2024-02-23 21:06:01 UTC Superseded Ubuntu Noble arm64 release universe science Optional 0~20150903+r2013-8build3
  • Removal requested .
  • Superseded by arm64 build of kmer 0~20150903+r2013-8build4 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed arm64 in Primary Archive for Ubuntu

Source package