r-bioc-saturn 1.10.0+dfsg-1 (amd64 binary) in ubuntu noble
This Bioconductor package can be used for Scalable Analysis of Differential
Transcript Usage for Bulk and Single-Cell RNA-sequencing.
.
Applications satuRn provides a higly
performant and scalable framework for performing differential
transcript usage analyses. The package consists of three main
functions. The first function, fitDTU, fits quasi-binomial
generalized linear models that model transcript usage in different
groups of interest. The second function, testDTU, tests for
differential usage of transcripts between groups of interest.
Finally, plotDTU visualizes the usage profiles of transcripts in
groups of interest.
Details
- Package version:
- 1.10.0+dfsg-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of r-bioc-saturn 1.10.0+dfsg-1 in ubuntu noble PROPOSED produced
these files:
- r-bioc-saturn_1.10.0+dfsg-1_all.deb (2.8 MiB)
Package relationships
- Depends on:
- r-api-4.0
- r-api-bioc-3.18
- r-bioc-biocparallel
- r-bioc-limma
- r-bioc-summarizedexperiment
- r-cran-boot
- r-cran-ggplot2
- r-cran-locfdr
- r-cran-matrix
- r-cran-pbapply