python3-pauvre binary package in Ubuntu Noble amd64

 Pauvre is a plotting package designed for nanopore and PacBio long reads.
 .
 This package currently hosts four scripts for plotting and/or printing stats.
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  pauvre marginplot
     Takes a fastq file as input and outputs a marginal histogram with a
     heatmap.
  pauvre stats
     Takes a fastq file as input and prints out a table of stats, including
     how many basepairs/reads there are for a length/mean quality cutoff.
     This is also automagically called when using pauvre marginplot
  pauvre redwood
     Method of representing circular genomes. A redwood plot contains long
     reads as "rings" on the inside, a gene annotation "cambrium/phloem",
     and a RNAseq "bark". The input is .bam files for the long reads and
     RNAseq data, and a .gff file for the annotation.
  pauvre synteny
     Makes a synteny plot of circular genomes. Finds the most parsimonius
     rotation to display the synteny of all the input genomes with the
     fewest crossings-over. Input is one .gff file per circular genome
     and one directory of gene alignments.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-10-29 15:04:47 UTC Published Ubuntu Noble amd64 release universe python Optional 0.2.3-3
  • Published
  • Copied from ubuntu noble-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Noble amd64 proposed universe python Optional 0.2.3-3
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to noble

  • Published
  2023-10-29 15:05:35 UTC Superseded Ubuntu Noble amd64 release universe python Optional 0.2.3-2
  • Removal requested .
  • Superseded by amd64 build of python-pauvre 0.2.3-3 in ubuntu noble PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu