gubbins 3.3.3-1 (amd64 binary) in ubuntu noble
Gubbins supports rapid phylogenetic analysis of large samples of
recombinant bacterial whole genome sequences.
.
Gubbins (Genealogies Unbiased By recomBinations In Nucleotide
Sequences) is an algorithm that iteratively identifies loci containing
elevated densities of base substitutions while concurrently constructing
a phylogeny based on the putative point mutations outside of these
regions. Simulations demonstrate the algorithm generates highly accurate
reconstructions under realistic models of short-term bacterial
evolution, and can be run in only a few hours on alignments of hundreds
of bacterial genome sequences.
Details
- Package version:
- 3.3.3-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of gubbins 3.3.3-1 in ubuntu noble PROPOSED produced
these files:
- gubbins_3.3.3-1_amd64.deb (82.6 KiB)
Package relationships
- Suggests:
- Recommends: