Binary package “murasaki-mpi” in ubuntu noble
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology
detection tool across multiple large genomes. It enable whole-genome
scale multiple genome global alignments. Supports unlimited length
gapped-seed patterns and unique TF-IDF based filtering.
.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with
40 nodes: 52 wall minutes))
* scalable (Arbitrarily parallelizable across multiple nodes using MPI.
Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
* unlimited pattern length
* repeat tolerant
* intelligent noise reduction
.
This package provides the MPI-enabled binary for murasaki. While this
will speed up operation on multi-processor machines it will slow down
on a single processor.
Source package
Published versions
- murasaki-mpi 1.68.6-13build3 in amd64 (Release)
- murasaki-mpi 1.68.6-13build6 in amd64 (Proposed)
- murasaki-mpi 1.68.6-13build6 in amd64 (Release)
- murasaki-mpi 1.68.6-13build3 in arm64 (Release)
- murasaki-mpi 1.68.6-13build6 in arm64 (Proposed)
- murasaki-mpi 1.68.6-13build6 in arm64 (Release)
- murasaki-mpi 1.68.6-13build3 in armhf (Release)
- murasaki-mpi 1.68.6-13build6 in armhf (Proposed)
- murasaki-mpi 1.68.6-13build6 in armhf (Release)
- murasaki-mpi 1.68.6-13build3 in ppc64el (Release)
- murasaki-mpi 1.68.6-13build6 in ppc64el (Proposed)
- murasaki-mpi 1.68.6-13build6 in ppc64el (Release)
- murasaki-mpi 1.68.6-13build3 in riscv64 (Release)
- murasaki-mpi 1.68.6-13build6 in riscv64 (Proposed)
- murasaki-mpi 1.68.6-13build6 in riscv64 (Release)
- murasaki-mpi 1.68.6-13build3 in s390x (Release)
- murasaki-mpi 1.68.6-13build6 in s390x (Proposed)
- murasaki-mpi 1.68.6-13build6 in s390x (Release)