Binary package “lagan” in ubuntu noble
highly parametrizable pairwise global genome sequence aligner
Lagan takes local alignments generated by CHAOS as anchors, and limits
the search area of the Needleman-Wunsch algorithm around these anchors.
.
Multi-LAGAN is a generalization of the pairwise algorithm to multiple
sequence alignment. M-LAGAN performs progressive pairwise alignments,
guided by a user-specified phylogenetic tree. Alignments are aligned to
other alignments using the sum-of-pairs metric.
Source package
Published versions
- lagan 2.0-9 in amd64 (Release)
- lagan 2.0-10 in amd64 (Proposed)
- lagan 2.0-10 in amd64 (Release)
- lagan 2.0-9 in arm64 (Release)
- lagan 2.0-10 in arm64 (Proposed)
- lagan 2.0-10 in arm64 (Release)
- lagan 2.0-9 in armhf (Release)
- lagan 2.0-10 in armhf (Proposed)
- lagan 2.0-10 in armhf (Release)
- lagan 2.0-9 in ppc64el (Release)
- lagan 2.0-10 in ppc64el (Proposed)
- lagan 2.0-10 in ppc64el (Release)
- lagan 2.0-9 in riscv64 (Release)
- lagan 2.0-10 in riscv64 (Proposed)
- lagan 2.0-10 in riscv64 (Release)
- lagan 2.0-9 in s390x (Release)
- lagan 2.0-10 in s390x (Proposed)
- lagan 2.0-10 in s390x (Release)