unikmer 0.19.1-1build1 (arm64 binary) in ubuntu mantic
unikmer is a golang package and a toolkit for nucleic acid k-mer
analysis, providing functions including set operation k-mers
optional with TaxIDs but without count information.
.
K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64,
and serialized in binary file with extension .unik.
.
TaxIDs can be assigned when counting k-mers from genome
sequences, and LCA (Lowest Common Ancestor) is computed during set
opertions including computing union, intersecton, set difference,
unique and repeated k-mers.
Details
- Package version:
- 0.19.1-1build1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
arm64 build of unikmer 0.19.1-1build1 in ubuntu mantic PROPOSED produced
these files:
- unikmer_0.19.1-1build1_arm64.deb (2.4 MiB)
Package relationships
- Depends on:
- Built-Using:
- golang-1.21 (= 1.21.0-1)
- golang-github-dustin-go-humanize (= 1.0.1-1)
- golang-github-klauspost-compress (= 1.15.12+ds1-3)
- golang-github-klauspost-pgzip (= 1.2.5-2)
- golang-github-mattn-go-colorable (= 0.1.13-1)
- golang-github-mattn-go-isatty (= 0.0.19-1)
- golang-github-mattn-go-runewidth (= 0.0.14-1)
- golang-github-mitchellh-go-homedir (= 1.1.0-1)
- golang-github-op-go-logging (= 1+git20160315.970db52-2)
- golang-github-pkg-errors (= 0.9.1-3)
- golang-github-rivo-uniseg (= 0.4.2-1)
- golang-github-shenwei356-bio (= 0.6.2-1)
- golang-github-shenwei356-breader (= 0.3.1-1)
- golang-github-shenwei356-kmers (= 0.1.0-2)
- golang-github-shenwei356-natsort (= 0.0~git20190418.600d539-3)
- golang-github-shenwei356-unik.v5 (= 5.0.1-2)
- golang-github-shenwei356-util (= 0.5.0-1)
- golang-github-shenwei356-xopen (= 0.0~git20181203.f4f16dd-2)
- golang-github-spf13-cobra (= 1.7.0-1)
- golang-github-spf13-pflag (= 1.0.6~git20210604-d5e0c0615ace-1)
- golang-github-tatsushid-go-prettytable (= 0.0~git20141013.ed2d14c-3)
- golang-github-twotwotwo-sorts (= 0.0~git20160814.bf5c1f2-3)
- golang-github-will-rowe-nthash (= 0.4.0-1)
- golang-github-zeebo-wyhash (= 0.0.1-3)
- golang-golang-x-sys (= 0.8.0-1)