r-cran-sctransform 0.3.5-1 (amd64 binary) in ubuntu mantic
A normalization method for single-cell UMI count data using a
variance stabilizing transformation. The transformation is based on a
negative binomial regression model with regularized parameters. As part of the
same regression framework, this package also provides functions for
batch correction, and data correction. See Hafemeister and Satija 2019
<doi:10.
Details
- Package version:
- 0.3.5-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of r-cran-sctransform 0.3.5-1 in ubuntu lunar PROPOSED produced
these files:
- r-cran-sctransform_0.3.5-1_amd64.deb (484.3 KiB)
Package relationships
- Depends on:
- libblas3
- libc6 (>= 2.29)
- libgcc-s1 (>= 3.0)
- liblapack3
- libstdc++6 (>= 9)
- r-api-4.0
- r-base-core (>= 4.2.2-1)
- r-cran-dplyr
- r-cran-future
- r-cran-future.apply
- r-cran-ggplot2
- r-cran-gridextra
- r-cran-magrittr
- r-cran-mass
- r-cran-matrix (>= 1.5-0)
- r-cran-matrixstats
- r-cran-rcpp (>= 0.11.0)
- r-cran-rcpparmadillo
- r-cran-reshape2
- r-cran-rlang
- Suggests:
- Recommends: