r-bioc-dnacopy 1.74.1-1 (amd64 binary) in ubuntu mantic
Implements the circular binary segmentation (CBS) algorithm to segment DNA
copy number data and identify genomic regions with abnormal copy number.
.
This package is for analyzing array DNA copy number data, which is usually
(but not always) called array Comparative Genomic Hybridization (array CGH)
data It implements a methodology for finding change-points in these data which
are points after which the (log) test over reference ratios have changed
location. This model is that the change-points correspond to positions where
the underlying DNA copy number has changed. Therefore, change-points can be
used to identify regions of gained and lost copy number. Also provided is a
function for making relevant plots of these data.
Details
- Package version:
- 1.74.1-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of r-bioc-dnacopy 1.74.1-1 in ubuntu mantic PROPOSED produced
these files:
- r-bioc-dnacopy_1.74.1-1_amd64.deb (370.6 KiB)
Package relationships
- Depends on:
- libc6 (>= 2.29)
- libgfortran5 (>= 10)
- r-api-4.0
- r-api-bioc-3.17