python3-pyabpoa binary package in Ubuntu Mantic amd64

 abPOA is an extended version of Partial Order Alignment (POA) that performs
 adaptive banded dynamic programming (DP) with an SIMD implementation. abPOA
 can perform multiple sequence alignment (MSA) on a set of input sequences and
 generate a consensus sequence by applying the heaviest bundling algorithm to
 the final alignment graph.
 .
 abPOA can generate high-quality consensus sequences from error-prone long
 reads and offer significant speed improvement over existing tools.
 .
 abPOA supports three alignment modes (global, local, extension) and flexible
 scoring schemes that allow linear, affine and convex gap penalties. It right
 now supports SSE2/SSE4.1/AVX2 vectorization.
 .
 This package provides the python3 module of abPOA.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-08-19 02:14:13 UTC Published Ubuntu Mantic amd64 release universe python Optional 1.4.1-4
  • Published
  • Copied from ubuntu mantic-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Mantic amd64 proposed universe python Optional 1.4.1-4
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to mantic

  • Published
  2023-08-19 02:14:26 UTC Superseded Ubuntu Mantic amd64 release universe python Optional 1.4.1-3build2
  • Removal requested .
  • Superseded by amd64 build of abpoa 1.4.1-4 in ubuntu mantic PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu

Source package