python3-ncls binary package in Ubuntu Mantic amd64
The Nested Containment List is a datastructure for interval overlap
queries, like the interval tree. It is usually an order of magnitude
faster than the interval tree both for building and query lookups.
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The implementation here is a revived version of the one used in the
now defunct PyGr library, which died of bitrot. It was now made less
memory-consuming and wrapper functions allow batch-querying
the NCLS for further speed gains.
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This package was implemented to be the cornerstone of the PyRanges project,
but was made available to the Python community as a stand-alone library.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2023-04-25 12:10:09 UTC | Published | Ubuntu Mantic amd64 | release | universe | python | Optional | 0.0.63-hotfix+ds-1build3 | ||
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