r-bioc-dnacopy binary package in Ubuntu Lunar amd64
Implements the circular binary segmentation (CBS) algorithm to segment DNA
copy number data and identify genomic regions with abnormal copy number.
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This package is for analyzing array DNA copy number data, which is usually
(but not always) called array Comparative Genomic Hybridization (array CGH)
data It implements a methodology for finding change-points in these data which
are points after which the (log) test over reference ratios have changed
location. This model is that the change-points correspond to positions where
the underlying DNA copy number has changed. Therefore, change-points can be
used to identify regions of gained and lost copy number. Also provided is a
function for making relevant plots of these data.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2023-01-26 19:24:19 UTC | Published | Ubuntu Lunar amd64 | release | universe | gnu-r | Optional | 1.72.3-1 | ||
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Deleted | Ubuntu Lunar amd64 | proposed | universe | gnu-r | Optional | 1.72.3-1 | |||
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2023-01-26 19:25:23 UTC | Superseded | Ubuntu Lunar amd64 | release | universe | gnu-r | Optional | 1.72.2-1 | ||
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2023-01-28 00:10:11 UTC | Deleted | Ubuntu Lunar amd64 | proposed | universe | gnu-r | Optional | 1.72.2-1 | ||
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2022-12-27 18:09:24 UTC | Superseded | Ubuntu Lunar amd64 | release | universe | gnu-r | Optional | 1.72.1-1 | ||
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2022-12-28 18:10:08 UTC | Deleted | Ubuntu Lunar amd64 | proposed | universe | gnu-r | Optional | 1.72.1-1 | ||
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2022-12-05 17:56:17 UTC | Superseded | Ubuntu Lunar amd64 | proposed | universe | gnu-r | Optional | 1.72.0-1 | ||
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2022-12-13 12:05:04 UTC | Superseded | Ubuntu Lunar amd64 | release | universe | gnu-r | Optional | 1.70.0-1 | ||
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