python3-presto binary package in Ubuntu Lunar amd64
pRESTO is a toolkit for processing raw reads from high-throughput
sequencing of B cell and T cell repertoires.
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Dramatic improvements in high-throughput sequencing technologies now
enable large-scale characterization of lymphocyte repertoires, defined
as the collection of trans-membrane antigen-receptor proteins located on
the surface of B cells and T cells. The REpertoire Sequencing TOolkit
(pRESTO) is composed of a suite of utilities to handle all stages
of sequence processing prior to germline segment assignment. pRESTO
is designed to handle either single reads or paired-end reads. It
includes features for quality control, primer masking, annotation of
reads with sequence embedded barcodes, generation of unique molecular
identifier (UMI) consensus sequences, assembly of paired-end reads and
identification of duplicate sequences. Numerous options for sequence
sorting, sampling and conversion operations are also included.
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This package provides the presto Python3 module.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2022-11-16 07:09:29 UTC | Published | Ubuntu Lunar amd64 | release | universe | python | Optional | 0.7.1-1 | ||
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Deleted | Ubuntu Lunar amd64 | proposed | universe | python | Optional | 0.7.1-1 | |||
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2022-11-16 07:15:01 UTC | Superseded | Ubuntu Lunar amd64 | release | universe | python | Optional | 0.7.0-1 | ||
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