plasmidseeker binary package in Ubuntu Lunar amd64
PlasmidSeeker is a k-mer based program for the identification of known
plasmids from bacterial whole genome sequencing reads.
.
PlasmidSeeker that enables the detection of plasmids from bacterial WGS
data without read assembly. The PlasmidSeeker algorithm is based on
k-mers and uses k-mer abundance to distinguish between plasmid and
bacterial sequences. The performance of PlasmidSeeker was tested on a set
of simulated and real bacterial WGS samples, resulting in 100%
sensitivity and 99.98% specificity.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2022-12-07 10:18:34 UTC | Published | Ubuntu Lunar amd64 | release | universe | science | Optional | 1.3+dfsg-3 | ||
|
|||||||||
Deleted | Ubuntu Lunar amd64 | proposed | universe | science | Optional | 1.3+dfsg-3 | |||
|
|||||||||
2022-12-07 10:19:25 UTC | Superseded | Ubuntu Lunar amd64 | release | universe | science | Optional | 1.3+dfsg-2 | ||
|