Ubuntu

parsnp binary package in Ubuntu Lunar amd64

  1. Lunar (23.04)
  2. amd64
  3. parsnp

 Parsnp was designed to align the core genome of hundreds to thousands of
 bacterial genomes within a few minutes to few hours. Input can be both
 draft assemblies and finished genomes, and output includes variant (SNP)
 calls, core genome phylogeny and multi-alignments. Parsnp leverages
 contextual information provided by multi-alignments surrounding SNP
 sites for filtration/cleaning, in addition to existing tools for
 recombination detection/filtration and phylogenetic reconstruction.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2022-11-16 13:57:19 UTC Published Ubuntu Lunar amd64 release universe science Optional 1.7.4+dfsg-2
  • Published
  • Copied from ubuntu lunar-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Lunar amd64 proposed universe science Optional 1.7.4+dfsg-2
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to lunar

  • Published
  2022-11-16 13:59:50 UTC Superseded Ubuntu Lunar amd64 release universe science Optional 1.7.4+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of parsnp 1.7.4+dfsg-2 in ubuntu lunar PROPOSED
  • Published
  • Copied from ubuntu kinetic-proposed amd64 in Primary Archive for Ubuntu

Source package