Binary package “parsnp” in ubuntu lunar
rapid core genome multi-alignment
Parsnp was designed to align the core genome of hundreds to thousands of
bacterial genomes within a few minutes to few hours. Input can be both
draft assemblies and finished genomes, and output includes variant (SNP)
calls, core genome phylogeny and multi-alignments. Parsnp leverages
contextual information provided by multi-alignments surrounding SNP
sites for filtration/
recombination detection/
Source package
Published versions
- parsnp 1.7.4+dfsg-2 in amd64 (Proposed)
- parsnp 1.7.4+dfsg-2 in amd64 (Release)
- parsnp 1.7.4+dfsg-2 in arm64 (Proposed)
- parsnp 1.7.4+dfsg-2 in arm64 (Release)
- parsnp 1.7.4+dfsg-2 in armhf (Proposed)
- parsnp 1.7.4+dfsg-2 in armhf (Release)
- parsnp 1.7.4+dfsg-2 in ppc64el (Proposed)
- parsnp 1.7.4+dfsg-2 in ppc64el (Release)
- parsnp 1.7.4+dfsg-2 in riscv64 (Proposed)
- parsnp 1.7.4+dfsg-2 in riscv64 (Release)
- parsnp 1.7.4+dfsg-2 in s390x (Proposed)
- parsnp 1.7.4+dfsg-2 in s390x (Release)