mindthegap-examples 2.2.3-4 (ppc64el binary) in ubuntu kinetic
Designed to call insertions of any size, whether they are novel or
duplicated, homozygous or heterozygous in the donor genome. it takes
as input a set of reads and a reference genome. It outputs two sets
of FASTA sequences: one is the set of breakpoints of detection
insertion sites, the other is the set of assembled insertions for
each breakpoint. MindTheGap can also be used as a genome assembly
finishing tool. It can fill the gap between a set of input contigs
without any a priori on their relative order and orientation. It
outputs the results in gfa file. Please note that this package is
meant to accommodate the mindthegap package and only acts as example
to how this package can be utilised.
Details
- Package version:
- 2.2.3-4
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of mindthegap 2.2.3-4 in ubuntu jammy PROPOSED produced
these files:
- mindthegap-examples_2.2.3-4_all.deb (594.0 KiB)