unikmer 0.18.8-1 (arm64 binary) in ubuntu kinetic
unikmer is a golang package and a toolkit for nucleic acid k-mer
analysis, providing functions including set operation k-mers
optional with TaxIDs but without count information.
.
K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64,
and serialized in binary file with extension .unik.
.
TaxIDs can be assigned when counting k-mers from genome
sequences, and LCA (Lowest Common Ancestor) is computed during set
opertions including computing union, intersecton, set difference,
unique and repeated k-mers.
Details
- Package version:
- 0.18.8-1
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
arm64 build of unikmer 0.18.8-1 in ubuntu jammy PROPOSED produced
these files:
- unikmer_0.18.8-1_arm64.deb (2.1 MiB)
Package relationships
- Depends on:
- Built-Using:
- golang-1.17 (= 1.17-1ubuntu2)
- golang-github-dustin-go-humanize (= 1.0.0-2)
- golang-github-klauspost-compress (= 1.13.6+ds1-2)
- golang-github-klauspost-pgzip (= 1.2.5-1)
- golang-github-mattn-go-colorable (= 0.1.8-1)
- golang-github-mattn-go-isatty (= 0.0.13-1)
- golang-github-mattn-go-runewidth (= 0.0.9-1)
- golang-github-mitchellh-go-homedir (= 1.1.0-1)
- golang-github-op-go-logging (= 1+git20160315.970db52-2)
- golang-github-pkg-errors (= 0.9.1-2)
- golang-github-shenwei356-bio (= 0.3.2-1)
- golang-github-shenwei356-bpool (= 0.0~git20160710.f9e0ee4-2)
- golang-github-shenwei356-breader (= 0.3.1-1)
- golang-github-shenwei356-natsort (= 0.0~git20190418.600d539-2)
- golang-github-shenwei356-util (= 0.4.0-1)
- golang-github-shenwei356-xopen (= 0.0~git20181203.f4f16dd-2)
- golang-github-spf13-cobra (= 1.2.1-2)
- golang-github-spf13-pflag (= 1.0.5-2)
- golang-github-tatsushid-go-prettytable (= 0.0~git20141013.ed2d14c-2)
- golang-github-twotwotwo-sorts (= 0.0~git20160814.bf5c1f2-2)
- golang-github-will-rowe-nthash (= 0.4.0-1)
- golang-github-zeebo-wyhash (= 0.0.1-2)
- golang-golang-x-sys (= 0.0~git20210806.e5e7981-1)