r-bioc-grohmm 1.26.0-1 (s390x binary) in ubuntu jammy
This BioConductor package provides a pipeline for the analysis of GRO-
seq data. Among the more advanced features, r-bioc-grohmm predicts the
boundaries of transcriptional activity across the genome de novo using a
two-state hidden Markov model (HMM).
.
The used model essentially divides the genome into transcribed and non-
transcribed regions in a strand specific manner. HMMs are used to
identify the leading edge of Pol II at genes activated by a stimulus in
GRO-seq time course data. This approach allows the genome-wide
interrogation of transcription rates in cells.
Details
- Package version:
- 1.26.0-1
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
s390x build of r-bioc-grohmm 1.26.0-1 in ubuntu jammy PROPOSED produced
these files:
- r-bioc-grohmm_1.26.0-1_s390x.deb (4.2 MiB)