pscan-tfbs binary package in Ubuntu Jammy armhf

 Pscan finds Over-represented Transcription Factor Binding Site Motifs in
 Sequences from Co-Regulated or Co-Expressed Genes.
 .
 Pscan is a software tool that scans a set of sequences (e.g. promoters)
 from co-regulated or co-expressed genes with motifs describing the
 binding specificity of known transcription factors and assesses which
 motifs are significantly over- or under-represented, providing thus
 hints on which transcription factors could be common regulators of the
 genes studied, together with the location of their candidate binding
 sites in the sequences. Pscan does not resort to comparisons with
 orthologous sequences and experimental results show that it compares
 favorably to other tools for the same task in terms of false positive
 predictions and computation time. The website is free and open to all
 users and there is no login requirement.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2021-12-14 00:38:49 UTC Published Ubuntu Jammy armhf release universe science Optional 1.2.2-4build1
  • Published
  • Copied from ubuntu jammy-proposed armhf in Primary Archive for Ubuntu
  Deleted Ubuntu Jammy armhf proposed universe science Optional 1.2.2-4build1
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2021-12-14 00:42:29 UTC Superseded Ubuntu Jammy armhf release universe science Optional 1.2.2-4
  • Removed from disk .
  • Removal requested .
  • Superseded by armhf build of pscan-tfbs 1.2.2-4build1 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu groovy-proposed armhf in Primary Archive for Ubuntu