libsnpeff-java 5.1+dfsg-2 (amd64 binary) in ubuntu jammy
SnpEff is a variant annotation and effect prediction tool. It annotates
and predicts the effects of variants on genes (such as amino acid
changes).
.
The inputs are predicted variants (SNPs, insertions, deletions and
MNPs). The input file is usually obtained as a result of a sequencing
experiment, and it is usually in variant call format (VCF).
.
SnpEff analyzes the input variants. It annotates the variants and
calculates the effects they produce on known genes (e.g. amino acid
changes).
.
This package contains the library.
Details
- Package version:
- 5.1+dfsg-2
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of snpeff 5.1+dfsg-2 in ubuntu jammy PROPOSED produced
these files:
- libsnpeff-java_5.1+dfsg-2_all.deb (1.6 MiB)
Package relationships
- Depends on:
- junit5 (>= 5.3.2)
- libapfloat-java (>= 1.10.1)
- libbiojava5-java
- libcharts4j-java (>= 1.3)
- libcommons-cli-java (>= 1.4)
- libcommons-codec-java (>= 1.15)
- libcommons-io-java (>= 2.11.0)
- libcommons-math3-java (>= 3.6.1)
- libdistlib-java (>= 1.0)
- libfreemarker-java
- libhtsjdk-java (>= 2.23.0)
- libjaxb-api-java (>= 2.3.1)
- libtrove3-java
- Suggests: