chromhmm-example 1.23+dfsg-1 (amd64 binary) in ubuntu jammy
ChromHMM is software for learning and characterizing chromatin states.
ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of
various histone modifications to discover de novo the major re-occuring
combinatorial and spatial patterns of marks. ChromHMM is based on a
multivariate Hidden Markov Model that explicitly models the presence or
absence of each chromatin mark. The resulting model can then be used to
systematically annotate a genome in one or more cell types. By automatically
computing state enrichments for large-scale functional and annotation datasets
ChromHMM facilitates the biological characterization of each state. ChromHMM
also produces files with genome-wide maps of chromatin state annotations that
can be directly visualized in a genome browser.
.
This package provides example to work with ChromHMM.
Details
- Package version:
- 1.23+dfsg-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
- chromhmm-example_1.23+dfsg-1_all.deb (36.3 MiB)
Package relationships
- Enhances: