Binary package “sga” in ubuntu jammy
de novo genome assembler that uses string graphs
The major goal of SGA is to be very memory efficient, which is achieved by
using a compressed representation of DNA sequence reads.
.
SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers'
string graph formulation of assembly and uses the FM-index/
transform to efficiently find overlaps between sequence reads.
Source package
Published versions
- sga 0.10.15-5build1 in amd64 (Release)
- sga 0.10.15-7 in amd64 (Proposed)
- sga 0.10.15-7 in amd64 (Release)
- sga 0.10.15-5build1 in arm64 (Release)
- sga 0.10.15-7 in arm64 (Proposed)
- sga 0.10.15-7 in arm64 (Release)
- sga 0.10.15-5build1 in armhf (Release)
- sga 0.10.15-7 in armhf (Proposed)
- sga 0.10.15-7 in armhf (Release)
- sga 0.10.15-5build1 in ppc64el (Release)
- sga 0.10.15-7 in ppc64el (Proposed)
- sga 0.10.15-7 in ppc64el (Release)
- sga 0.10.15-5build1 in riscv64 (Release)
- sga 0.10.15-7 in riscv64 (Proposed)
- sga 0.10.15-7 in riscv64 (Release)